PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XSN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	92.3	H1	13	H1-13-1	17	AVSGASISSNYWS	BBBLBBAAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	50.0	H2	10	H2-10-1	22	RIYDPTDSTD	BBBAAALBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	100.0	H3	14	H3-14-*	-1	ARGLWSGYFFWFDV	BBBBBBEABBBBAB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	75.0	H4	8	H4-8-1	11	KDTSKNHF	BBAAALBB
L	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	54.5	L1	11	L1-11-2	7	RASQGIDKELS	BBABBALLBBB
L	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	87.5	L2	8	L2-8-*	-1	YAASSLQT	ABLABBBB
L	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	28.6	L3	9	L3-9-cis7-1	9	LQDYATPYS	BBAABBbBB
L	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	100.0	L4	6	L4-6-1	11	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022