PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XRT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	CDRLenMismatch	-1.0	H1	15	H1-15-*	-1	AVSGggDSFGFHYWN	BBABAEAAAAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	70.0	H2	10	H2-10-*	-1	HIGGSSGSTD	BBBAAAEBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	100.0	H3	24	H3-24-*	-1	ARKGEDFYEddygqyftagWFFDL
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	62.5	H4	8	H4-8-*	-1	MDSSRNQF	BALAALBB
L	lambda	Macaca.mulatta	Ma_IGLV1-7*01	92.6	Ma_IGLV1-7*01	76.9	L1	13	L1-13-*	-1	TGRSSNFGGHYVQ	BBBAABBABABBB
L	lambda	Macaca.mulatta	Ma_IGLV1-7*01	92.6	Ma_IGLV1-7*01	62.5	L2	8	L2-8-*	-1	FENDRRPS	ABEABBBB
L	lambda	Macaca.mulatta	Ma_IGLV1-7*01	92.6	Ma_IGLV1-7*01	0.0	L3	8	L3-8-*	-1	QCYDSSVL	BBBAAABB
L	lambda	Macaca.mulatta	Ma_IGLV1-7*01	92.6	Ma_IGLV1-7*01	83.3	L4	6	L4-6-2	22	QSGASA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022