PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XQW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	94.5	Hu_IGHV4-34*01	92.3	H1	13	H1-13-*	-1	AVYGGSFSGYYWT	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	94.5	Hu_IGHV4-34*01	77.8	H2	9	H2-9-*	-1	EINNSGKTN	BBBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	94.5	Hu_IGHV4-34*01	100.0	H3	14	H3-14-*	-1	ARGPQQHLEPPFDY	BBBBAAALBBBLAB
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	94.5	Hu_IGHV4-34*01	87.5	H4	8	H4-8-*	-1	IDTSKNQF	BBBAAALB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	69.2	L1	13	L1-13-*	-1	SGSNSNIATNYVC	BBBAAAAABEBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	75.0	L2	8	L2-8-1	16	YRTDQRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	77.8	L3	11	L3-11-1	12	ATWDDSLSAWV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-47*01	97.1	Hu_IGLV1-47*01	100.0	L4	6	L4-6-2	16	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022