PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XPY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-59*02	89.0	Hu_IGHV4-59*02	84.6	H1	13	H1-13-*	-1	TVSGGSLSIYYWS	BBBBBBAEABBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*02	89.0	Hu_IGHV4-59*02	55.6	H2	9	H2-9-1	17	YISNSGSPT	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*02	89.0	Hu_IGHV4-59*02	100.0	H3	21	H3-21-*	-1	ARGvleqlapDFDSYYYGMNV
B	heavy	Homo.sapiens	Hu_IGHV4-59*02	89.0	Hu_IGHV4-59*02	75.0	H4	8	H4-8-1	13	LDTSKSQF	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	15	RASQPIRSYLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	75.0	L2	8	L2-8-*	-1	YAVSNLQS	BEBLBBBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	100.0	L3	9	L3-9-*	-1	QQSYSTPYT	BBAABAALB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022