PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XPQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-61*08	89.0	Hu_IGHV4-61*08	73.3	H1	15	H1-15-*	-1	SVSGGSVSSnlHYWS	BBBLBBABBABBBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*08	89.0	Hu_IGHV4-61*08	66.7	H2	9	H2-9-1	17	YISYTGSTK	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*08	89.0	Hu_IGHV4-61*08	100.0	H3	18	H3-18-*	-1	ARDFFEKliadDLNAFDI
B	heavy	Homo.sapiens	Hu_IGHV4-61*08	89.0	Hu_IGHV4-61*08	75.0	H4	8	H4-8-1	13	IDASKNQF	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	25	RASQSISRSLN	BBABBAEBBBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	87.5	L2	8	L2-8-*	-1	YAASNLQS	BLLABBBA
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	42.9	L3	7	L3-7-*	-1	QETYSRT
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	92.8	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022