PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XP6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	kappa	Homo.sapiens	Hu_IGKV1-12*01	97.1	Hu_IGKV1-12*01	81.8	L1	11	L1-11-1	4	RASQDISNWLA	BBABBAEABBB
G	kappa	Homo.sapiens	Hu_IGKV1-12*01	97.1	Hu_IGKV1-12*01	62.5	L2	8	L2-8-1	7	YDSSTLQS	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV1-12*01	97.1	Hu_IGKV1-12*01	71.4	L3	9	L3-9-cis7-1	10	QQFNSYPLT	BBAABBbBB
G	kappa	Homo.sapiens	Hu_IGKV1-12*01	97.1	Hu_IGKV1-12*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	None	-1.0	H1	15	H1-15-*	-1	KASGGTVRSrvHAIS	BBBLBBAAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	90.0	H2	10	H2-10-*	-1	GIIPIFGTAN	BBBAABEBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H3	11	H3-11-*	-1	ARDVQRMGMDV	BBBBLLAEBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H4	8	H4-8-1	7	ADESTSTA	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1-12*01	97.1	Hu_IGKV1-12*01	81.8	L1	11	L1-11-1	4	RASQDISNWLA	BBABBAEABBB
I	kappa	Homo.sapiens	Hu_IGKV1-12*01	97.1	Hu_IGKV1-12*01	62.5	L2	8	L2-8-1	7	YDSSTLQS	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV1-12*01	97.1	Hu_IGKV1-12*01	71.4	L3	9	L3-9-cis7-1	10	QQFNSYPLT	BBAABBbBB
I	kappa	Homo.sapiens	Hu_IGKV1-12*01	97.1	Hu_IGKV1-12*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
J	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	None	-1.0	H1	15	H1-15-*	-1	KASGGTVRSrvHAIS	BBBEEBAAAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	90.0	H2	10	H2-10-*	-1	GIIPIFGTAN	BBBAABEBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H3	11	H3-11-*	-1	ARDVQRMGMDV	BBBBLLAEBAB
J	heavy	Homo.sapiens	Hu_IGHV1-69*15	100.0	Hu_IGHV1-69*15	100.0	H4	8	H4-8-1	7	ADESTSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022