PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XOC

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Mo_IGHV1S61*01	95.9	Mo_IGHV1S61*01	92.3	H1	13	H1-13-*	-1	KASAYTFTSYWIN	BBBAAAAAABBBB
A	heavy	Homo.sapiens	Mo_IGHV1S61*01	95.9	Mo_IGHV1S61*01	100.0	H2	10	H2-10-1	10	NIYPGSSSTN	BBBAAALBBB
A	heavy	Homo.sapiens	Mo_IGHV1S61*01	95.9	Mo_IGHV1S61*01	100.0	H3	15	H3-15-*	-1	ARLDSgDWYYYGLDY
A	heavy	Homo.sapiens	Mo_IGHV1S61*01	95.9	Mo_IGHV1S61*01	75.0	H4	8	H4-8-1	8	VDRSSRTA	BBAAALBB
B	kappa	Homo.sapiens	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	7	RSSQNIvhyngNTYLE	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	87.5	L2	8	L2-8-1	10	YQVSNRFS	BLEABBBB
B	kappa	Homo.sapiens	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	11	FQGSHVPFT	BBAABBbBB
B	kappa	Homo.sapiens	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	9	KASGYTFTGYYMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	10	WINPNSGGTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H3	14	H3-14-*	-1	ARGKNCDYNWDFQH	BBBABBEBBABBAB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	10	RDTSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L1	11	L1-11-*	-1	RASQSVSSYLA	BBBLBABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	8	YDASNRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	0.0	L3	5	L3-5-1	7	QQYEF	BBEAB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100.0	Hu_IGKV3-11*01	100.0	L4	6	L4-6-2	8	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022