PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XOB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
M	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	84.6	H1	13	H1-13-*	-1	AASGFTFSNYGIH	BBBBALAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	80.0	H2	10	H2-10-*	-1	VISYDGRHKY	BBBAABABBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	100.0	H3	13	H3-13-*	-1	AKDTSGWYEFFDS	BBBBLLBBABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	87.5	H4	8	H4-8-*	-1	RDNSKNML	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	72.7	L1	11	L1-11-*	-1	RASQSVATNVA	BAABBBBAAAL
N	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L2	8	L2-8-*	-1	YGASTRAT	ABBLLABB
N	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	57.1	L3	8	L3-8-*	-1	QQCNDWLT	BBBBBBAA
N	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-*	-1	GSGTEF	BBBABA
O	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	84.6	H1	13	H1-13-*	-1	AASGFTFSNYGIH	BBBBALAAABBBB
O	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	80.0	H2	10	H2-10-*	-1	VISYDGRHKY	BBBAABABBB
O	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	100.0	H3	13	H3-13-*	-1	AKDTSGWYEFFDS	BBBBLLBBABBBB
O	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	87.5	H4	8	H4-8-*	-1	RDNSKNML	BBAAALBB
P	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	72.7	L1	11	L1-11-*	-1	RASQSVATNVA	BAABBBBAAAL
P	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L2	8	L2-8-*	-1	YGASTRAT	ABBLLABB
P	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	57.1	L3	8	L3-8-*	-1	QQCNDWLT	BBBBBBAA
P	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-*	-1	GSGTEF	BBBABA
Q	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	84.6	H1	13	H1-13-*	-1	AASGFTFSNYGIH	BBBBALAAABBBB
Q	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	80.0	H2	10	H2-10-*	-1	VISYDGRHKY	BBBAABABBB
Q	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	100.0	H3	13	H3-13-*	-1	AKDTSGWYEFFDS	BBBBLLBBABBBB
Q	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	87.5	H4	8	H4-8-*	-1	RDNSKNML	BBAAALBB
R	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	72.7	L1	11	L1-11-*	-1	RASQSVATNVA	BAABBBBAAAL
R	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L2	8	L2-8-*	-1	YGASTRAT	ABBLLABB
R	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	57.1	L3	8	L3-8-*	-1	QQCNDWLT	BBBBBBAA
R	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-*	-1	GSGTEF	BBBABA
S	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	84.6	H1	13	H1-13-*	-1	AASGFTFSNYGIH	BBBBALAAABBBB
S	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	80.0	H2	10	H2-10-*	-1	VISYDGRHKY	BBBAABABBB
S	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	100.0	H3	13	H3-13-*	-1	AKDTSGWYEFFDS	BBBBLLBBABBBB
S	heavy	Homo.sapiens	Hu_IGHV3-30*18	94.5	Hu_IGHV3-30*18	87.5	H4	8	H4-8-*	-1	RDNSKNML	BBAAALBB
T	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	72.7	L1	11	L1-11-*	-1	RASQSVATNVA	BAABBBBAAAL
T	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L2	8	L2-8-*	-1	YGASTRAT	ABBLLABB
T	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	57.1	L3	8	L3-8-*	-1	QQCNDWLT	BBBBBBAA
T	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-*	-1	GSGTEF	BBBABA

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022