PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XLI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	100.0	H1	13	H1-13-1	10	AASGFTFSSYAMS	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	77.8	H2	9	H2-9-1	6	SISKGGNTY	BBBAALBBB
A	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	100.0	H3	12	H3-12-*	-1	ARGWGDYGWFAY	BBBBEAAEABAB
A	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	100.0	H4	8	H4-8-1	10	RDNARNIL	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	81.8	L1	11	L1-11-2	7	KASQDINRYLN	BBABBALLBBB
B	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	87.5	L2	8	L2-8-1	6	YRANRLLD	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	100.0	L3	9	L3-9-cis7-1	5	LQYDEFPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	100.0	L4	6	L4-6-1	7	GSGQDY	EBEABB
C	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYAMS	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	77.8	H2	9	H2-9-1	6	SISKGGNTY	BBBAALBBB
C	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	100.0	H3	12	H3-12-*	-1	ARGWGDYGWFAY	BBBEEAAEAAAB
C	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	100.0	H4	8	H4-8-1	10	RDNARNIL	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	81.8	L1	11	L1-11-2	7	KASQDINRYLN	BBABBALLBBB
D	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	87.5	L2	8	L2-8-1	6	YRANRLLD	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	100.0	L3	9	L3-9-cis7-1	5	LQYDEFPLT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	100.0	L4	6	L4-6-1	7	GSGQDY	EBEABB
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYAMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	77.8	H2	9	H2-9-1	6	SISKGGNTY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	100.0	H3	12	H3-12-*	-1	ARGWGDYGWFAY	BBBBEAAEABAB
H	heavy	Mus.musculus	Mo_IGHV5-6-5*01	94.5	Mo_IGHV5-6-5*01	100.0	H4	8	H4-8-1	9	RDNARNIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	81.8	L1	11	L1-11-2	7	KASQDINRYLN	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	87.5	L2	8	L2-8-1	7	YRANRLLD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	100.0	L3	9	L3-9-cis7-1	5	LQYDEFPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV14-111*01	98.6	Mo_IGKV14-111*01	100.0	L4	6	L4-6-1	8	GSGQDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022