PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XKQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	90.4	Hu_IGHV1-18*01	69.2	H1	13	H1-13-*	-1	KASGYNFTNFAIS	BALLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	90.4	Hu_IGHV1-18*01	80.0	H2	10	H2-10-1	9	WISGYNGDTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	90.4	Hu_IGHV1-18*01	50.0	H3	15	H3-15-*	-1	AGSDNYGfPYNGMDV
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	90.4	Hu_IGHV1-18*01	87.5	H4	8	H4-8-1	12	TDTSTTTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	64.3	L1	14	L1-14-2	5	TGTSSDLGAyHFVT	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	75.0	L2	8	L2-8-4	18	YGVRKRPS	BEAABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	77.8	L3	10	L3-10-*	-1	SSYAGNNDFV	BBBALBLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	12	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022