PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XEY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H1	13	H1-13-*	-1	KASGYTFTGYYMH	BBBEBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	11	WINPNSGGTN	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDRSWaVVYYYMDV
F	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	14	RDTSISTA	BBAAALBB
G	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L1	14	L1-14-*	-1	TGTSSDVGgYNYVS	BEABLBAAABABAB
G	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L2	8	L2-8-*	-1	YEVSKRPS	BBEABBBB
G	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	88.9	L3	10	L3-10-*	-1	SSYAGSNNLV	BBALELLBBB
G	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-*	-1	KSGNTA	ALEBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H1	13	H1-13-*	-1	KASGYTFTGYYMH	BBBEBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	12	WINPNSGGTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDRSWaVVYYYMDV
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	13	RDTSISTA	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H1	13	H1-13-*	-1	KASGYTFTGYYMH	BBBEBBABEBBBB
J	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	9	WINPNSGGTN	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDRSWaVVYYYMDV
J	heavy	Homo.sapiens	Hu_IGHV1-2*02	95.9	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	10	RDTSISTA	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L1	14	L1-14-*	-1	TGTSSDVGgYNYVS	BBBAAAAAAAELBB
K	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L2	8	L2-8-*	-1	YEVSKRPS	ABAABBBB
K	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	88.9	L3	10	L3-10-*	-1	SSYAGSNNLV	BBALLBABBB
K	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-*	-1	KSGNTA	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L1	14	L1-14-*	-1	TGTSSDVGgYNYVS	BBBABLAAABBLBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L2	8	L2-8-*	-1	YEVSKRPS	ABAABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	88.9	L3	10	L3-10-*	-1	SSYAGSNNLV	BBALELLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-*	-1	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022