PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XCJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	83.6	Ma_IGHV1-1*01	61.5	H1	13	H1-13-1	10	KASGYGFTIYSIN	BBBLBBAAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	83.6	Ma_IGHV1-1*01	50.0	H2	10	H2-10-1	9	WINPRNGRIG	BBBAAALBBB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	83.6	Ma_IGHV1-1*01	100.0	H3	14	H3-14-*	-1	TRGQLELTASRFDK	BBBBBEABABLBAB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	83.6	Ma_IGHV1-1*01	62.5	H4	8	H4-8-1	13	RDTSTSIA	BBAAALBB
L	kappa	Macaca.mulatta	Ma_IGKV2S17*01	97.1	Ma_IGKV2S17*01	88.2	L1	17	L1-17-1	15	RSSQSLldradgNTYLD	BBABBABBAAALBBBBB
L	kappa	Macaca.mulatta	Ma_IGKV2S17*01	97.1	Ma_IGKV2S17*01	100.0	L2	8	L2-8-1	7	YEVSNRAS	BLEABBBB
L	kappa	Macaca.mulatta	Ma_IGKV2S17*01	97.1	Ma_IGKV2S17*01	85.7	L3	9	L3-9-cis7-1	10	MQGLEFPYS	BBAABBbBB
L	kappa	Macaca.mulatta	Ma_IGKV2S17*01	97.1	Ma_IGKV2S17*01	100.0	L4	6	L4-6-1	12	GSDTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022