PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XC7

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-66*03	95.9	Ca_IGHV1S1*01	84.6	H1	13	H1-13-1	10	AASGFTVSSNYMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-66*03	95.9	Ca_IGHV1S1*01	66.7	H2	9	H2-9-1	9	VIYSGGSTF	BBBAALBBB
C	heavy	Homo.sapiens	Hu_IGHV3-66*03	95.9	Hu_IGHV3-66*03	100.0	H3	11	H3-11-*	-1	ARDFGDFYFDY	BBBBLLABBAB
C	heavy	Homo.sapiens	Hu_IGHV3-66*03	95.9	Hu_IGHV3-66*03	87.5	H4	8	H4-8-1	6	RDNSKSTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Ca_IGKV1-7*01	81.8	L1	11	L1-11-1	25	RASQSVSSYLA	BBABBALABBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Ca_IGKV1-7*01	75.0	L2	8	L2-8-1	14	YGASSRAT	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	5	QQYGSSPRT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	76.9	H1	13	H1-13-*	-1	KGSGYGFITYWIG	BBBEBLAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	12	IIYPGDSETR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	50.0	H3	12	H3-12-*	-1	AGGSGISTPMDV	BBBABBLBBBAB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	10	ADKSINTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	19	KSSQSVlyssinKNYLA	BBABBBBBAAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	10	YWASTRES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L3	9	L3-9-cis7-1	9	QQYYSTPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022