PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XC2

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	92.3	H1	13	H1-13-1	12	AASGLTVSSNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	9	VIYSGGSTF	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDLDVYGLDV	BBBBAAAEBAB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L1	11	L1-11-*	-1	RASQGISSYLA	BBABBAAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	11	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L3	11	L3-11-*	-1	QQLNSyppKFT	BBBLBAABABB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	16	GSGTEF	EBEABB
X	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	92.3	H1	13	H1-13-*	-1	AASGLTVSSNYMS	BBAABBAAABBBB
X	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	9	VIYSGGSTF	BBBAALBBB
X	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDLDVYGLDV	BBBBAAAEBAB
X	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
Y	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L1	11	L1-11-*	-1	RASQGISSYLA	BBABBAAABBB
Y	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	11	YAASTLQS	BLLABBBB
Y	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L3	11	L3-11-*	-1	QQLNSyppKFT	BBBLBAABABB
Y	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L4	6	L4-6-3	44	GSGTEF	EABABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022