PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6X97

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	Rb_IGHV1S40*01	64.3	H1	14	H1-14-*	-1	KASGFDFSdNYYIC	BBBLBBABBBBBBB
E	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	CIFTQNVRTY	BBBAABBBBB
E	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	Rb_IGHV1S40*01	100.0	H3	15	H3-15-*	-1	ARFSDTGPDYGLgNL
E	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	Rb_IGHV1S40*01	100.0	H4	7	H4-7-*	-1	KTSSTTV	BABAABB
F	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	72.7	L1	11	L1-11-1	9	QASQRIGSHVS	BBABBAEABBB
F	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	75.0	L2	8	L2-8-*	-1	YGASNLES	ABAABBBB
F	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	30.0	L3	15	L3-15-*	-1	QATYdpytggSYGAG
F	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	100.0	L4	6	L4-6-1	11	GSGTQF	EBEABB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	Rb_IGHV1S40*01	64.3	H1	14	H1-14-*	-1	KASGFDFSdNYYIC	BBBLBBABBBBBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	CIFTQNVRTY	BBBAABBBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	Rb_IGHV1S40*01	100.0	H3	15	H3-15-*	-1	ARFSDTGPDYGLgNL
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	Rb_IGHV1S40*01	100.0	H4	7	H4-7-*	-1	KTSSTTV	BABAABB
J	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	Rb_IGHV1S40*01	64.3	H1	14	H1-14-*	-1	KASGFDFSdNYYIC	BBBLBBABBBBBBB
J	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	CIFTQNVRTY	BBBAABBBBB
J	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	Rb_IGHV1S40*01	100.0	H3	15	H3-15-*	-1	ARFSDTGPDYGLgNL
J	heavy	Oryctolagus.cuniculus	Rb_IGHV1S40*01	89.9	Rb_IGHV1S40*01	100.0	H4	7	H4-7-*	-1	KTSSTTV	BABAABB
K	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	72.7	L1	11	L1-11-1	9	QASQRIGSHVS	BBABBAEABBB
K	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	75.0	L2	8	L2-8-*	-1	YGASNLES	ABAABBBB
K	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	30.0	L3	15	L3-15-*	-1	QATYdpytggSYGAG
K	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	100.0	L4	6	L4-6-1	11	GSGTQF	EBEABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	72.7	L1	11	L1-11-1	9	QASQRIGSHVS	BBABBAEABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	75.0	L2	8	L2-8-*	-1	YGASNLES	ABAABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	30.0	L3	15	L3-15-*	-1	QATYdpytggSYGAG
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S37*01	89.9	Rb_IGKV1S37*01	100.0	L4	6	L4-6-1	11	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022