PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6X87

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	100.0	H1	13	H1-13-1	15	KASGYTFTSYNMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	70.0	H2	10	H2-10-1	18	YIYPGNGVTN	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	50.0	H3	5	H3-5-*	-1	ASAAY	BBEAB
A	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	75.0	H4	8	H4-8-1	10	ADTSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	93.8	L1	16	L1-16-1	9	KSSQSLlysdgKTYLN	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	75.0	L2	8	L2-8-1	11	SLVSELDS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	12	WQGTHFPRT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	100.0	H1	13	H1-13-1	15	KASGYTFTSYNMH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	70.0	H2	10	H2-10-1	18	YIYPGNGVTN	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	50.0	H3	5	H3-5-*	-1	ASAAY	BBEAB
C	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	75.0	H4	8	H4-8-1	10	ADTSSSTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	93.8	L1	16	L1-16-1	9	KSSQSLlysdgKTYLN	BBABBABBAALBBBBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	75.0	L2	8	L2-8-1	11	SLVSELDS	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	12	WQGTHFPRT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	100.0	H1	13	H1-13-1	15	KASGYTFTSYNMH	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	70.0	H2	10	H2-10-1	18	YIYPGNGVTN	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	50.0	H3	5	H3-5-*	-1	ASAAY	BBEAB
E	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	75.0	H4	8	H4-8-1	10	ADTSSSTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	93.8	L1	16	L1-16-1	9	KSSQSLlysdgKTYLN	BBABBABBAALBBBBB
F	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	75.0	L2	8	L2-8-1	11	SLVSELDS	BLEABBBB
F	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	12	WQGTHFPRT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
G	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	100.0	H1	13	H1-13-1	15	KASGYTFTSYNMH	BBBLBBAAABBBB
G	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	70.0	H2	10	H2-10-1	18	YIYPGNGVTN	BBBAAALBBB
G	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	50.0	H3	5	H3-5-*	-1	ASAAY	BBEAB
G	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	75.0	H4	8	H4-8-1	10	ADTSSSTA	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	93.8	L1	16	L1-16-1	9	KSSQSLlysdgKTYLN	BBABBABBAALBBBBB
H	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	75.0	L2	8	L2-8-1	11	SLVSELDS	BLEABBBB
H	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	12	WQGTHFPRT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
I	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	100.0	H1	13	H1-13-1	15	KASGYTFTSYNMH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	70.0	H2	10	H2-10-1	18	YIYPGNGVTN	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	50.0	H3	5	H3-5-*	-1	ASAAY	BBEAB
I	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	75.0	H4	8	H4-8-1	10	ADTSSSTA	BBAAALBB
J	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	93.8	L1	16	L1-16-1	9	KSSQSLlysdgKTYLN	BBABBABBAALBBBBB
J	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	75.0	L2	8	L2-8-1	11	SLVSELDS	BLEABBBB
J	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	12	WQGTHFPRT	BBAABBbBB
J	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
K	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	100.0	H1	13	H1-13-1	15	KASGYTFTSYNMH	BBBLBBAAABBBB
K	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	70.0	H2	10	H2-10-1	18	YIYPGNGVTN	BBBAAALBBB
K	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	50.0	H3	5	H3-5-*	-1	ASAAY	BBEAB
K	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	75.0	H4	8	H4-8-1	10	ADTSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	93.8	L1	16	L1-16-1	9	KSSQSLlysdgKTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	75.0	L2	8	L2-8-1	11	SLVSELDS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	12	WQGTHFPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
M	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	100.0	H1	13	H1-13-1	15	KASGYTFTSYNMH	BBBLBBAAABBBB
M	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	70.0	H2	10	H2-10-1	18	YIYPGNGVTN	BBBAAALBBB
M	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	50.0	H3	5	H3-5-*	-1	ASAAY	BBEAB
M	heavy	Mus.musculus	Mo_IGHV1-12*01	91.7	Mo_IGHV1-12*01	75.0	H4	8	H4-8-1	10	ADTSSSTA	BBAAALBB
N	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	93.8	L1	16	L1-16-1	9	KSSQSLlysdgKTYLN	BBABBABBAALBBBBB
N	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	75.0	L2	8	L2-8-1	11	SLVSELDS	BLEABBBB
N	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	12	WQGTHFPRT	BBAABBbBB
N	kappa	Mus.musculus	Mo_IGKV1-135*01	100.0	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022