PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6X78

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	6	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L2	8	L2-8-*	-1	YLVSKLDS	BLAABBBB
A	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	9	WQGTHFPQT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-55*01	90.4	Mo_IGHV1-55*01	92.3	H1	13	H1-13-1	7	KASGYTFTSYWIA	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-55*01	90.4	Mo_IGHV1-55*01	90.0	H2	10	H2-10-1	6	DIYPGSGYTN	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-55*01	90.4	Mo_IGHV1-55*01	50.0	H3	15	H3-15-*	-1	TRGGTTFvAEPWLAY
B	heavy	Mus.musculus	Mo_IGHV1-55*01	90.4	Mo_IGHV1-55*01	87.5	H4	8	H4-8-1	6	VDTSSNTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV1-55*01	90.4	Mo_IGHV1-55*01	92.3	H1	13	H1-13-1	7	KASGYTFTSYWIA	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-55*01	90.4	Mo_IGHV1-55*01	90.0	H2	10	H2-10-1	6	DIYPGSGYTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-55*01	90.4	Mo_IGHV1-55*01	50.0	H3	15	H3-15-*	-1	TRGGTTFvAEPWLAY
H	heavy	Mus.musculus	Mo_IGHV1-55*01	90.4	Mo_IGHV1-55*01	87.5	H4	8	H4-8-1	7	VDTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	6	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L2	8	L2-8-*	-1	YLVSKLDS	BLAABBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L3	9	L3-9-2	10	WQGTHFPQT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022