PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6X5E

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV12-41*01	95.7	Mo_IGKV12-41*01	63.6	L1	11	L1-11-1	14	RTSENIHNFLT	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV12-41*01	95.7	Mo_IGKV12-41*01	87.5	L2	8	L2-8-1	15	YNAKTLPD	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV12-41*01	95.7	Mo_IGKV12-41*01	85.7	L3	9	L3-9-cis7-1	19	QHFWSSPWT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV12-41*01	95.7	Mo_IGKV12-41*01	100.0	L4	6	L4-6-1	6	GSGTQY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	92.3	H1	13	H1-13-1	12	AASGFTFSDAWMN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	58.3	H2	12	H2-12-*	-1	EIRSKviNPAIY	BBBBAABAALBB
B	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	50.0	H3	17	H3-17-*	-1	SRSTMITTrdpSRYFDV
B	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	100.0	H4	8	H4-8-1	8	RDDSKSSV	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	92.3	H1	13	H1-13-1	21	AASGFTFSDAWMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	58.3	H2	12	H2-12-*	-1	EIRSKviNPAIY	BBBBLBABALBB
H	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	50.0	H3	17	H3-17-*	-1	SRSTMITTrdpSRYFDV
H	heavy	Mus.musculus	Mo_IGHV6-6*01	97.3	Mo_IGHV6-6*01	100.0	H4	8	H4-8-1	10	RDDSKSSV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	95.7	Mo_IGKV12-41*01	63.6	L1	11	L1-11-1	19	RTSENIHNFLT	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	95.7	Mo_IGKV12-41*01	87.5	L2	8	L2-8-1	12	YNAKTLPD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	95.7	Mo_IGKV12-41*01	85.7	L3	9	L3-9-cis7-1	19	QHFWSSPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	95.7	Mo_IGKV12-41*01	100.0	L4	6	L4-6-1	10	GSGTQY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022