PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6X1W

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S31*01	87.1	Rb_IGHV1S31*01	76.9	H1	13	H1-13-1	9	TASGFSLSSYGFS	BBBLBBAAABBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S31*01	87.1	Rb_IGHV1S31*01	33.3	H2	9	H2-9-1	17	YLHANGRAY	BBBAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S31*01	87.1	Rb_IGHV1S31*01	50.0	H3	11	H3-11-*	-1	AKIGSVSDVAI	BBALAABABBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S31*01	87.1	Rb_IGHV1S31*01	100.0	H4	8	H4-8-1	10	RNTNLNTV	BBAAALBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S15*01	92.3	Rb_IGKV1S15*01	53.8	L1	13	L1-13-3	11	QSSESIynNKNLA	BBABBBBLLABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S15*01	92.3	Rb_IGKV1S15*01	75.0	L2	8	L2-8-1	6	YSISTLAS	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S15*01	92.3	Rb_IGKV1S15*01	50.0	L3	19	L3-19-*	-1	VGYYysggyyysgsAAYYA
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S15*01	92.3	Rb_IGKV1S15*01	100.0	L4	6	L4-6-1	9	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022