PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6X1V

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S28*01	87.1	Rb_IGHV1S28*01	69.2	H1	13	H1-13-1	15	TASGFSIDSYGFS	BBBLBBAAABBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S28*01	87.1	Rb_IGHV1S28*01	44.4	H2	9	H2-9-1	15	YLTAGGRAF	BBBAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S28*01	87.1	Rb_IGHV1S28*01	50.0	H3	11	H3-11-*	-1	AKLGSGNPVAI	BBALAABABBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S28*01	87.1	Rb_IGHV1S28*01	100.0	H4	8	H4-8-1	10	RNTNENTV	BBAAALBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	89.6	Rb_IGKV1S12*01	61.5	L1	13	L1-13-3	13	QSSQSVwrNKNLA	BBABBBBLLABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	89.6	Rb_IGKV1S12*01	50.0	L2	8	L2-8-1	7	YAIATLDS	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	89.6	Rb_IGKV1S12*01	22.2	L3	13	L3-13-*	-1	VGHygseNDAYYA	BBBBEBAABBBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	89.6	Rb_IGKV1S12*01	100.0	L4	6	L4-6-1	9	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022