PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WYR

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-8*01	94.5	Hu_IGHV1-8*01	76.9	H1	13	H1-13-*	-1	KTSGYTFNNYDIN	BBBAAAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-8*01	94.5	Hu_IGHV1-8*01	90.0	H2	10	H2-10-1	9	WMNPYSGNTG	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-8*01	94.5	Hu_IGHV1-8*01	100.0	H3	16	H3-16-*	-1	AREVRgdtgYGGGSDY
H	heavy	Homo.sapiens	Hu_IGHV1-8*01	94.5	Hu_IGHV1-8*01	62.5	H4	8	H4-8-1	9	RNISITTV	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV1-8*01	94.5	Hu_IGHV1-8*01	76.9	H1	13	H1-13-*	-1	KTSGYTFNNYDIN	BBBAAAAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-8*01	94.5	Hu_IGHV1-8*01	90.0	H2	10	H2-10-1	12	WMNPYSGNTG	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-8*01	94.5	Hu_IGHV1-8*01	100.0	H3	16	H3-16-*	-1	AREVRGDtgYGGGSDY
I	heavy	Homo.sapiens	Hu_IGHV1-8*01	94.5	Hu_IGHV1-8*01	62.5	H4	8	H4-8-1	10	RNISITTV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	72.7	L1	11	L1-11-4	16	SGDKLDDNYVC	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	75.0	L2	8	L2-8-1	6	YQDTMRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	75.0	L3	9	L3-9-4	25	QAWDGSTVV	BBBBEABBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	83.3	L4	6	L4-6-*	-1	NSGNIA	BBLLBB
M	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	72.7	L1	11	L1-11-3	7	SGDKLDDNYVC	BBBLAAABBBB
M	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	75.0	L2	8	L2-8-1	6	YQDTMRPS	BLLABBBB
M	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	75.0	L3	9	L3-9-4	25	QAWDGSTVV	BBBBEABBB
M	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	83.3	L4	6	L4-6-*	-1	NSGNIA	BBLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022