PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WWC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-15*01	91.8	Mo_IGHV1-15*01	76.9	H1	13	H1-13-1	9	KASGYAFSDYEIH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-15*01	91.8	Mo_IGHV1-15*01	50.0	H2	10	H2-10-1	10	AFDPKSGASA	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-15*01	91.8	Mo_IGHV1-15*01	100.0	H3	11	H3-11-*	-1	TRLRYFGYFDV	BBBBBLBBBAB
A	heavy	Mus.musculus	Mo_IGHV1-15*01	91.8	Mo_IGHV1-15*01	100.0	H4	8	H4-8-1	12	ADKSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	75.0	L1	16	L1-16-1	12	RSSQSVvysdgDTYLE	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	87.5	L2	8	L2-8-*	-1	YKVSRRFS	BLAABBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	12	FQGSHVPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L4	6	L4-6-2	16	GSGTDF	BBEABB
D	heavy	Mus.musculus	Mo_IGHV1-15*01	91.8	Mo_IGHV1-15*01	76.9	H1	13	H1-13-1	8	KASGYAFSDYEIH	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1-15*01	91.8	Mo_IGHV1-15*01	50.0	H2	10	H2-10-1	10	AFDPKSGASA	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1-15*01	91.8	Mo_IGHV1-15*01	100.0	H3	11	H3-11-*	-1	TRLRYFGYFDV	BBBBBLBBBAB
D	heavy	Mus.musculus	Mo_IGHV1-15*01	91.8	Mo_IGHV1-15*01	100.0	H4	8	H4-8-1	11	ADKSSSTA	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	75.0	L1	16	L1-16-1	10	RSSQSVvysdgDTYLE	BBABBABBAALBBBBB
H	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	87.5	L2	8	L2-8-*	-1	YKVSRRFS	BLAABBBB
H	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	12	FQGSHVPYT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV1-117*01	95.7	Mo_IGKV1-117*01	100.0	L4	6	L4-6-2	14	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022