PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WTY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	69.2	H1	13	H1-13-*	-1	KASGgtFNRYVFS
B	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	60.0	H2	10	H2-10-1	16	GILPILETTY	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	100.0	H3	19	H3-19-*	-1	ARDEHDYVWGSYRpsltgP
B	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	75.0	H4	8	H4-8-1	5	ADESTSTV	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	71.4	L1	14	L1-14-2	14	TGTGIDVGGfSYVS	BBBAAAAAABABBB
C	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	75.0	L2	8	L2-8-1	14	FEVTKRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	77.8	L3	10	L3-10-*	-1	SSYAVNNNFV	BBBBBLLBBB
C	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	15	KSGNTA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	69.2	H1	13	H1-13-*	-1	KASggtFNRYVFS
E	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	60.0	H2	10	H2-10-1	15	GILPILETTY	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	100.0	H3	19	H3-19-*	-1	ARDEHDYVWGSYRpsltgP
E	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	75.0	H4	8	H4-8-1	9	ADESTSTV	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	71.4	L1	14	L1-14-2	15	TGTGIDVGGfSYVS	BBBAAAAAABABBB
F	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	75.0	L2	8	L2-8-1	9	FEVTKRPS	BLLABBBB
F	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	77.8	L3	10	L3-10-*	-1	SSYAVNNNFV	BBBBBLLBBB
F	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	20	KSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	69.2	H1	13	H1-13-*	-1	KASGGTFNRYVFS	BBABBLAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	60.0	H2	10	H2-10-1	12	GILPILETTY	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	100.0	H3	19	H3-19-*	-1	ARDEHDYVWGSYRpsltgP
H	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	75.0	H4	8	H4-8-1	8	ADESTSTV	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	71.4	L1	14	L1-14-2	18	TGTGIDVGGfSYVS	BBBAAAAAABBABB
I	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	75.0	L2	8	L2-8-1	13	FEVTKRPS	BLEABBBB
I	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	77.8	L3	10	L3-10-*	-1	SSYAVNNNFV	BBBBBLLBBB
I	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB
K	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	69.2	H1	13	H1-13-*	-1	KAsgGTFNRYVFS
K	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	60.0	H2	10	H2-10-1	13	GILPILETTY	BBBAAALBBB
K	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	100.0	H3	19	H3-19-*	-1	ARDEHDYVWGSYRpsltgP
K	heavy	Homo.sapiens	Hu_IGHV1-69*16	87.7	Hu_IGHV1-69*16	75.0	H4	8	H4-8-1	17	ADESTSTV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	71.4	L1	14	L1-14-2	16	TGTGIDVGGfSYVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	75.0	L2	8	L2-8-1	16	FEVTKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	77.8	L3	10	L3-10-*	-1	SSYAVNNNFV	BBBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	89.7	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	16	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022