PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WTV

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	17	AASGFTFTPYAMT	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	90.0	H2	10	H2-10-2	11	TISGSGGSTY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	50.0	H3	16	H3-16-*	-1	TKDKDEYtfGHNAFDV
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	19	RDNSKNML	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	63.6	L1	11	L1-11-4	21	GGDNIGRKTVN	BBABAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	13	YYDNDRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	77.8	L3	11	L3-11-1	18	QVWDSNNDHPV	BBBBAAALBBB
C	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	83.3	L4	6	L4-6-2	15	NSGNMA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	13	AASGFTFTPYAMT	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	90.0	H2	10	H2-10-2	13	TISGSGGSTY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	50.0	H3	16	H3-16-*	-1	TKDKDEYtfGHNAFDV
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	11	RDNSKNML	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	63.6	L1	11	L1-11-4	20	GGDNIGRKTVN	BBABAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	12	YYDNDRPS	BLEABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	77.8	L3	11	L3-11-1	18	QVWDSNNDHPV	BBBBAAALBBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	83.3	L4	6	L4-6-2	15	NSGNMA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	16	AASGFTFTPYAMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	90.0	H2	10	H2-10-2	11	TISGSGGSTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	50.0	H3	16	H3-16-*	-1	TKDKDEYtfGHNAFDV
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	13	RDNSKNML	BBAAALBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	63.6	L1	11	L1-11-4	23	GGDNIGRKTVN	BBABAAABBBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	13	YYDNDRPS	BLEABBBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	77.8	L3	11	L3-11-1	14	QVWDSNNDHPV	BBBBAAALBBB
I	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	83.3	L4	6	L4-6-*	-1	NSGNMA	BBAABB
K	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	17	AASGFTFTPYAMT	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	90.0	H2	10	H2-10-2	14	TISGSGGSTY	BBBAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	50.0	H3	16	H3-16-*	-1	TKDKDEYtfGHNAFDV
K	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	87.5	H4	8	H4-8-1	16	RDNSKNML	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	63.6	L1	11	L1-11-4	24	GGDNIGRKTVN	BBABAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	87.5	L2	8	L2-8-1	15	YYDNDRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	77.8	L3	11	L3-11-1	19	QVWDSNNDHPV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	91.0	Hu_IGLV3-21*01	83.3	L4	6	L4-6-2	14	NSGNMA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022