PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WQO

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-34*06	93.1	Hu_IGHV4-34*06	76.9	H1	13	H1-13-*	-1	TVYGGSSSGYYWN	BBBLBBBBABBBB
B	heavy	Homo.sapiens	Hu_IGHV4-34*06	93.1	Hu_IGHV4-34*06	66.7	H2	9	H2-9-1	22	EISDSGSTI	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-34*06	93.1	Hu_IGHV4-34*06	0.0	H3	13	H3-13-*	-1	AKAILTRYNWLDP	BBBABAABABBAB
B	heavy	Homo.sapiens	Hu_IGHV4-34*06	93.1	Hu_IGHV4-34*06	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-13*02	89.7	Hu_IGKV1-13*02	81.8	L1	11	L1-11-1	9	RASQGVNSALA	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-13*02	89.7	Hu_IGKV1-13*02	87.5	L2	8	L2-8-1	7	YDASTLES	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-13*02	89.7	Hu_IGKV1-13*02	100.0	L3	9	L3-9-cis7-1	14	QQFNSYPLT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-13*02	89.7	Hu_IGKV1-13*02	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV4-34*06	93.1	Hu_IGHV4-34*06	76.9	H1	13	H1-13-*	-1	TVYGGSSSGYYWN	BBAABBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV4-34*06	93.1	Hu_IGHV4-34*06	66.7	H2	9	H2-9-1	18	EISDSGSTI	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV4-34*06	93.1	Hu_IGHV4-34*06	0.0	H3	13	H3-13-*	-1	AKAILTRYNWLDP	BBBABAABABBAB
E	heavy	Homo.sapiens	Hu_IGHV4-34*06	93.1	Hu_IGHV4-34*06	100.0	H4	8	H4-8-1	12	VDTSKNQF	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-13*02	89.7	Hu_IGKV1-13*02	81.8	L1	11	L1-11-1	14	RASQGVNSALA	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-13*02	89.7	Hu_IGKV1-13*02	87.5	L2	8	L2-8-1	10	YDASTLES	BLEABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-13*02	89.7	Hu_IGKV1-13*02	100.0	L3	9	L3-9-cis7-1	7	QQFNSYPLT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1-13*02	89.7	Hu_IGKV1-13*02	100.0	L4	6	L4-6-*	-1	GSGTDF	BALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022