PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WPT

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	92.3	H1	13	H1-13-1	15	KASGYPFTSYGIS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	90.0	H2	10	H2-10-1	14	WISTYNGNTN	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	100.0	H3	20	H3-20-*	-1	ARDYTRGAWfgesliGGFDN
D	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	75.0	H4	8	H4-8-1	14	TDTSTTTG	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.1	Hu_IGKV3-20*02	75.0	L1	12	L1-12-1	6	RASQTVSStSLA	BBABBBBAAABB
E	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.1	Hu_IGKV3-20*02	100.0	L2	8	L2-8-1	9	YGASSRAT	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.1	Hu_IGKV3-20*02	100.0	L3	8	L3-8-1	14	QQHDTSLT	BBAABEBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.1	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	92.3	H1	13	H1-13-1	17	KASGYPFTSYGIS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	90.0	H2	10	H2-10-1	16	WISTYNGNTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	100.0	H3	20	H3-20-*	-1	ARDYTRGAWfgesliGGFDN
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.5	Hu_IGHV1-18*01	75.0	H4	8	H4-8-1	14	TDTSTTTG	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.1	Hu_IGKV3-20*02	75.0	L1	12	L1-12-*	-1	RASQTVSStSLA	BBABBBAEAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.1	Hu_IGKV3-20*02	100.0	L2	8	L2-8-1	9	YGASSRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.1	Hu_IGKV3-20*02	100.0	L3	8	L3-8-1	13	QQHDTSLT	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.1	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022