PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WO5

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*02	88.6	Hu_IGHV1-69*02	61.5	H1	13	H1-13-*	-1	KPSDGTFRAYTLS	BBAALBBBBBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*02	88.6	Hu_IGHV1-69*02	60.0	H2	10	H2-10-1	10	RIMPTVGITN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*02	88.6	Hu_IGHV1-69*02	50.0	H3	14	H3-14-*	-1	AKGPYVGLGEGFSE	BBBBAAEBEAEBAB
A	heavy	Homo.sapiens	Hu_IGHV1-69*02	88.6	Hu_IGHV1-69*02	75.0	H4	8	H4-8-*	-1	ADMSTATA	BBBLALBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*01	89.7	Hu_IGKV2-30*01	93.8	L1	16	L1-16-1	7	RSTQSLvysdgNTYLN	BBABBABBAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*01	89.7	Hu_IGKV2-30*01	100.0	L2	8	L2-8-1	8	YKVSNRDS	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*01	89.7	Hu_IGKV2-30*01	85.7	L3	9	L3-9-cis7-1	16	MQGAHWPPT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV2-30*01	89.7	Hu_IGKV2-30*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-69*02	88.6	Hu_IGHV1-69*02	61.5	H1	13	H1-13-*	-1	KPSDGTFRAYTLS	BBAALBBBBBBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*02	88.6	Hu_IGHV1-69*02	60.0	H2	10	H2-10-1	13	RIMPTVGITN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*02	88.6	Hu_IGHV1-69*02	50.0	H3	14	H3-14-*	-1	AKGPYVGLGEGFSE	BBBBAAEBEAEBAB
C	heavy	Homo.sapiens	Hu_IGHV1-69*02	88.6	Hu_IGHV1-69*02	75.0	H4	8	H4-8-1	15	ADMSTATA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-30*01	89.7	Hu_IGKV2-30*01	93.8	L1	16	L1-16-1	8	RSTQSLvysdgNTYLN	BBABBABBAALBBBBB
D	kappa	Homo.sapiens	Hu_IGKV2-30*01	89.7	Hu_IGKV2-30*01	100.0	L2	8	L2-8-1	14	YKVSNRDS	BLEABBBB
D	kappa	Homo.sapiens	Hu_IGKV2-30*01	89.7	Hu_IGKV2-30*01	85.7	L3	9	L3-9-cis7-1	15	MQGAHWPPT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV2-30*01	89.7	Hu_IGKV2-30*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-69*03	94.1	Hu_IGHV1-69*03	84.6	H1	13	H1-13-*	-1	KASGGTLSSYGIS	BBBLEBAAAALBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*03	94.1	Hu_IGHV1-69*03	60.0	H2	10	H2-10-1	26	GSIPILGTSV	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*03	94.1	Hu_IGHV1-69*03	0.0	H3	18	H3-18-*	-1	AGVREGmaaiSGKNAFDI
G	heavy	Homo.sapiens	Hu_IGHV1-69*03	94.1	Hu_IGHV1-69*03	100.0	H4	8	H4-8-1	11	ADESTSTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	94.1	Hu_IGHV1-69*03	84.6	H1	13	H1-13-*	-1	KASGGTLSSYGIS	BBBLBBAAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	94.1	Hu_IGHV1-69*03	60.0	H2	10	H2-10-1	25	GSIPILGTSV	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	94.1	Hu_IGHV1-69*03	0.0	H3	18	H3-18-*	-1	AGVREGmaaiSGKNAFDI
H	heavy	Homo.sapiens	Hu_IGHV1-69*03	94.1	Hu_IGHV1-69*03	100.0	H4	8	H4-8-1	8	ADESTSTA	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1-27*01	97.1	Hu_IGKV1-27*01	100.0	L1	11	L1-11-1	5	RASQGISNYLA	BBABBAEABBB
I	kappa	Homo.sapiens	Hu_IGKV1-27*01	97.1	Hu_IGKV1-27*01	100.0	L2	8	L2-8-1	12	YAASTLQS	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV1-27*01	97.1	Hu_IGKV1-27*01	28.6	L3	9	L3-9-cis7-1	13	QQHDNLPLT	BBAABBbBB
I	kappa	Homo.sapiens	Hu_IGKV1-27*01	97.1	Hu_IGKV1-27*01	66.7	L4	6	L4-6-1	11	GYGTEF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-27*01	97.1	Hu_IGKV1-27*01	100.0	L1	11	L1-11-1	8	RASQGISNYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-27*01	97.1	Hu_IGKV1-27*01	100.0	L2	8	L2-8-1	7	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-27*01	97.1	Hu_IGKV1-27*01	28.6	L3	9	L3-9-cis7-1	9	QQHDNLPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-27*01	97.1	Hu_IGKV1-27*01	66.7	L4	6	L4-6-1	15	GYGTEF	EBEABB

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