PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WNO

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	91.8	Hu_IGHV3-30*18	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	91.8	Hu_IGHV3-30*18	80.0	H2	10	H2-10-2	12	FISYDGDNKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	91.8	Hu_IGHV3-30*18	100.0	H3	13	H3-13-*	-1	AKESNYGENAFDI	BBBBAABAABBAB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	91.8	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV2-11*01	85.7	L1	14	L1-14-*	-1	TGTSSDVGfYNFVS	BABAAAAAAALABB
C	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV2-11*01	87.5	L2	8	L2-8-*	-1	YDVSERPS	BEAABBBA
C	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV2-11*01	88.9	L3	10	L3-10-*	-1	CSYAGTYTFV	BBBAELLBBB
C	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	13	KSGNTA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-30*18	91.8	Hu_IGHV3-30*18	100.0	H1	13	H1-13-1	12	AASGFTFSSYGMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*18	91.8	Hu_IGHV3-30*18	80.0	H2	10	H2-10-2	11	FISYDGDNKY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*18	91.8	Hu_IGHV3-30*18	100.0	H3	13	H3-13-*	-1	AKESNYGENAFDI	BBBBAABAABBAB
E	heavy	Homo.sapiens	Hu_IGHV3-30*18	91.8	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV2-11*01	85.7	L1	14	L1-14-*	-1	TGTSSDVGfYNFVS	BBBAAAAAAALBBB
F	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV2-11*01	87.5	L2	8	L2-8-1	29	YDVSERPS	BLEABBBB
F	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV2-11*01	88.9	L3	10	L3-10-*	-1	CSYAGTYTFV	BBBBEBLBBB
F	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	14	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022