PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WN4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-62-2*01	97.3	Mo_IGHV1-62-2*01	92.3	H1	13	H1-13-1	11	KASGYTFTEYIIH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-62-2*01	97.3	Mo_IGHV1-62-2*01	90.0	H2	10	H2-10-1	8	WFYPGSGNIK	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-62-2*01	97.3	Mo_IGHV1-62-2*01	100.0	H3	14	H3-14-*	-1	ARHEDRNYYSYWDY	BBBBAABAABBBAB
A	heavy	Mus.musculus	Mo_IGHV1-62-2*01	97.3	Mo_IGHV1-62-2*01	100.0	H4	8	H4-8-1	8	ADKSSSTV	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV4-68*01	100.0	Mo_IGKV4-68*01	90.0	L1	10	L1-10-1	6	SASSSVSNMY	BBABBBABBB
B	kappa	Mus.musculus	Mo_IGKV4-68*01	100.0	Mo_IGKV4-68*01	100.0	L2	8	L2-8-1	7	YLTSNLAS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV4-68*01	100.0	Mo_IGKV4-68*01	87.5	L3	9	L3-9-cis7-1	12	QQWSSNPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV4-68*01	100.0	Mo_IGKV4-68*01	100.0	L4	6	L4-6-1	7	GSGTSY	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1-62-2*01	97.3	Mo_IGHV1-62-2*01	92.3	H1	13	H1-13-1	11	KASGYTFTEYIIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-62-2*01	97.3	Mo_IGHV1-62-2*01	90.0	H2	10	H2-10-1	8	WFYPGSGNIK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-62-2*01	97.3	Mo_IGHV1-62-2*01	100.0	H3	14	H3-14-*	-1	ARHEDRNYYSYWDY	BBBBAABAABBBAB
H	heavy	Mus.musculus	Mo_IGHV1-62-2*01	97.3	Mo_IGHV1-62-2*01	100.0	H4	8	H4-8-1	8	ADKSSSTV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-68*01	100.0	Mo_IGKV4-68*01	90.0	L1	10	L1-10-1	6	SASSSVSNMY	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-68*01	100.0	Mo_IGKV4-68*01	100.0	L2	8	L2-8-1	6	YLTSNLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-68*01	100.0	Mo_IGKV4-68*01	87.5	L3	9	L3-9-cis7-1	12	QQWSSNPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-68*01	100.0	Mo_IGKV4-68*01	100.0	L4	6	L4-6-1	7	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022