PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WMW

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV9-3-1*01	94.5	Mo_IGHV9-3-1*01	76.9	H1	13	H1-13-1	19	KASGYTFTDYGVI	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV9-3-1*01	94.5	Mo_IGHV9-3-1*01	100.0	H2	10	H2-10-1	18	WINTYTGEPT	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV9-3-1*01	94.5	Mo_IGHV9-3-1*01	100.0	H3	11	H3-11-*	-1	ARRYGPEDIDY	BBBBaAABBAB
H	heavy	Homo.sapiens	Mo_IGHV9-3-1*01	94.5	Mo_IGHV9-3-1*01	87.5	H4	8	H4-8-1	18	LETSASSA	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV3-2*01	97.1	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	8	RASESVDNYgisfMS	BBABBABBLLBBBBB
L	kappa	Homo.sapiens	Mo_IGKV3-2*01	97.1	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASHQGS	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV3-2*01	97.1	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-1	10	LQSKEVPWT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV3-2*01	97.1	Mo_IGKV3-2*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Mo_IGHV1-82*01	97.3	Mo_IGHV1-82*01	69.2	H1	13	H1-13-1	13	KASGYTFTSYWVN	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Mo_IGHV1-82*01	97.3	Mo_IGHV1-82*01	100.0	H2	10	H2-10-1	21	RIYPGDGDTN	BBBAAALBBB
M	heavy	Homo.sapiens	Mo_IGHV1-82*01	97.3	Mo_IGHV1-82*01	100.0	H3	18	H3-18-*	-1	ARAYllrlRRTGYYAMDY
M	heavy	Homo.sapiens	Mo_IGHV1-82*01	97.3	Mo_IGHV1-82*01	100.0	H4	8	H4-8-1	11	ADKSSSTA	BBAAALBB
N	kappa	Homo.sapiens	Mo_IGKV1-99*01	100.0	Mo_IGKV1-99*01	93.8	L1	16	L1-16-1	15	KSTKSLLNsdeftYLD	BBABBABBAALBBBBB
N	kappa	Homo.sapiens	Mo_IGKV1-99*01	100.0	Mo_IGKV1-99*01	87.5	L2	8	L2-8-1	12	FLVSNRFS	BLEABBBB
N	kappa	Homo.sapiens	Mo_IGKV1-99*01	100.0	Mo_IGKV1-99*01	100.0	L3	9	L3-9-cis7-1	9	FQSNYLPYT	BBAABBbBB
N	kappa	Homo.sapiens	Mo_IGKV1-99*01	100.0	Mo_IGKV1-99*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022