PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WJU

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV2-137*01	92.8	Mo_IGKV2-137*01	93.8	L1	16	L1-16-*	-1	RSSKSLlhsdgntyLY
A	kappa	Mus.musculus	Mo_IGKV2-137*01	92.8	Mo_IGKV2-137*01	100.0	L2	8	L2-8-4	11	YRMSNLAS	BEAABBBB
A	kappa	Mus.musculus	Mo_IGKV2-137*01	92.8	Mo_IGKV2-137*01	100.0	L3	9	L3-9-2	21	MQHLEYPFT	BBAABABBB
A	kappa	Mus.musculus	Mo_IGKV2-137*01	92.8	Mo_IGKV2-137*01	83.3	L4	6	L4-6-2	17	GSGTVF	BBEABB
B	heavy	Mus.musculus	Mo_IGHV14-4*02	94.5	Mo_IGHV14-4*02	92.3	H1	13	H1-13-*	-1	TASGFNIEDyyMH
B	heavy	Mus.musculus	Mo_IGHV14-4*02	94.5	Mo_IGHV14-4*02	90.0	H2	10	H2-10-*	-1	WIDPVNGDTE	BBBAAABBAB
B	heavy	Mus.musculus	Mo_IGHV14-4*02	94.5	Mo_IGHV14-4*02	50.0	H3	10	H3-10-*	-1	NFYDGYLFAF	BBBALBLBBB
B	heavy	Mus.musculus	Mo_IGHV14-4*02	94.5	Mo_IGHV14-4*02	100.0	H4	8	H4-8-*	-1	adTSSNTA
H	heavy	Mus.musculus	Mo_IGHV14-4*02	94.5	Mo_IGHV14-4*02	92.3	H1	13	H1-13-*	-1	TASGFNIEdyyMH
H	heavy	Mus.musculus	Mo_IGHV14-4*02	94.5	Mo_IGHV14-4*02	90.0	H2	10	H2-10-*	-1	WIDPVNGDTE	BBBAABBBBB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	94.5	Mo_IGHV14-4*02	50.0	H3	10	H3-10-*	-1	NFYDGYLFAF	BBBALAABBB
H	heavy	Mus.musculus	Mo_IGHV14-4*02	94.5	Mo_IGHV14-4*02	100.0	H4	8	H4-8-*	-1	ADTssNTA
L	kappa	Mus.musculus	Mo_IGKV2-137*01	92.8	Mo_IGKV2-137*01	93.8	L1	16	L1-16-*	-1	RSSKSLlhsdgNTYLY	BBABALBBAALBBABB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	92.8	Mo_IGKV2-137*01	100.0	L2	8	L2-8-*	-1	YRMSNLAS	ABLABBBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	92.8	Mo_IGKV2-137*01	100.0	L3	9	L3-9-2	22	MQHLEYPFT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV2-137*01	92.8	Mo_IGKV2-137*01	83.3	L4	6	L4-6-2	23	GSGTVF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022