PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WIT

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Macaca.mulatta	Ma_IGHV1-1*01	78.1	Ma_IGHV1-1*01	76.9	H1	13	H1-13-1	9	KASGYTFTDYSLH	BBBLBBAAABBBB
A	heavy	Macaca.mulatta	Ma_IGHV1-1*01	78.1	Ma_IGHV1-1*01	20.0	H2	10	H2-10-*	-1	RVDPEDGESH	BBBAABABBB
A	heavy	Macaca.mulatta	Ma_IGHV1-1*01	78.1	Ma_IGHV1-1*01	0.0	H3	22	H3-22-*	-1	ATDHREDGPTYfsgvqwvpFRF
A	heavy	Macaca.mulatta	Ma_IGHV1-1*01	78.1	Ma_IGHV1-1*01	62.5	H4	8	H4-8-1	14	ADTSTDTA	BBAAALBB
B	lambda	Macaca.mulatta	Ma_IGLV6-1*01	98.5	Ma_IGLV6-1*01	100.0	L1	13	L1-13-*	-1	TRSSGSIDSEYVQ	BBAABBAAABBBB
B	lambda	Macaca.mulatta	Ma_IGLV6-1*01	98.5	Ma_IGLV6-1*01	100.0	L2	8	L2-8-1	10	YKDNQRPS	BLLABBBB
B	lambda	Macaca.mulatta	Ma_IGLV6-1*01	98.5	Ma_IGLV6-1*01	42.9	L3	10	L3-10-*	-1	QSPDGRYNRV	BBBBEAABBB
B	lambda	Macaca.mulatta	Ma_IGLV6-1*01	98.5	Ma_IGLV6-1*01	100.0	L4	8	L4-8-1	13	idSSSNSA	BBAAALBB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	78.1	Ma_IGHV1-1*01	76.9	H1	13	H1-13-1	10	KASGYTFTDYSLH	BBBLBBAAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	78.1	Ma_IGHV1-1*01	20.0	H2	10	H2-10-1	9	RVDPEDGESH	BBBAAALBBB
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	78.1	Ma_IGHV1-1*01	0.0	H3	22	H3-22-*	-1	ATDHREDGPTYfsgvqwvpFRF
H	heavy	Macaca.mulatta	Ma_IGHV1-1*01	78.1	Ma_IGHV1-1*01	62.5	H4	8	H4-8-1	9	ADTSTDTA	BBAAALBB
L	lambda	Macaca.mulatta	Ma_IGLV6-1*01	98.5	Ma_IGLV6-1*01	100.0	L1	13	L1-13-2	7	TRSSGSIDSEYVQ	BBABEBAAABBBB
L	lambda	Macaca.mulatta	Ma_IGLV6-1*01	98.5	Ma_IGLV6-1*01	100.0	L2	8	L2-8-1	10	YKDNQRPS	BLLABBBB
L	lambda	Macaca.mulatta	Ma_IGLV6-1*01	98.5	Ma_IGLV6-1*01	42.9	L3	10	L3-10-*	-1	QSPDGRYNRV	BBBBEAABBB
L	lambda	Macaca.mulatta	Ma_IGLV6-1*01	98.5	Ma_IGLV6-1*01	100.0	L4	8	L4-8-1	8	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022