PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WGB

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	98.6	Hu_IGHV3-23*04	69.2	H1	13	H1-13-1	9	AGSGFTFRDYAMT	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	98.6	Hu_IGHV3-23*04	80.0	H2	10	H2-10-2	6	SISGSGGNTY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	98.6	Hu_IGHV3-23*04	100.0	H3	18	H3-18-*	-1	AKDRlsitirpryyGLDV
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	98.6	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	87.5	L1	16	L1-16-*	-1	RSSQSLlysigYNYLD
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L2	8	L2-8-*	-1	YLGSNRAS	BLLABBBA
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L3	9	L3-9-cis7-1	11	MQALQTPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	98.6	Hu_IGHV3-23*04	69.2	H1	13	H1-13-1	18	AGSGFTFRDYAMT	BBBLEBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	98.6	Hu_IGHV3-23*04	80.0	H2	10	H2-10-*	-1	SISGSggnty
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	98.6	Hu_IGHV3-23*04	100.0	H3	18	H3-18-*	-1	AKDRlsitirpryygLDV
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	98.6	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	87.5	L1	16	L1-16-*	-1	RSSQSLlysigynyLD
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L2	8	L2-8-*	-1	YlGSNRAS
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L3	9	L3-9-cis7-*	-1	MQALQTPYT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L4	6	L4-6-*	-1	GsGTDF

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022