PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WEQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	61.5	H1	13	H1-13-*	-1	KASGCTLTNCFMH	BBBLBBAABLBBB
E	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	80.0	H2	10	H2-10-1	11	YINPYNDMTK	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	100.0	H3	13	H3-13-*	-1	ARGYLLRTGCFDY	BBBBBABBEBBAB
E	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	100.0	H4	8	H4-8-1	12	SDKSSSTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	93.3	L1	15	L1-15-1	9	RASESVDSYgysfMH	BBABBABBLLBBBBB
F	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L2	8	L2-8-4	18	YLASNLES	BEAABBBB
F	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	85.7	L3	9	L3-9-cis7-1	10	QQNNENPLT	BBBABBbBB
F	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	9	GSRTDF	EBEABB
G	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	61.5	H1	13	H1-13-*	-1	KASGCTLTNCFMH	BBBLBBAABLBBB
G	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	80.0	H2	10	H2-10-1	11	YINPYNDMTK	BBBAAALBBB
G	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	100.0	H3	13	H3-13-*	-1	ARGYLLRTGCFDY	BBBBBAABEBBAB
G	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	100.0	H4	8	H4-8-1	11	SDKSSSTA	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	93.3	L1	15	L1-15-1	9	RASESVDSYgysfMH	BBABBABBLLBBBBB
H	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L2	8	L2-8-4	20	YLASNLES	BEAABBBB
H	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	85.7	L3	9	L3-9-cis7-1	10	QQNNENPLT	BBBABBbBB
H	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	10	GSRTDF	EBEABB
I	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	61.5	H1	13	H1-13-*	-1	KASGCTLTNCFMH	BBBLBBAABLBBB
I	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	80.0	H2	10	H2-10-1	11	YINPYNDMTK	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	100.0	H3	13	H3-13-*	-1	ARGYLLRTGCFDY	BBBBBAABEBBAB
I	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	100.0	H4	8	H4-8-1	11	SDKSSSTA	BBAAALBB
J	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	93.3	L1	15	L1-15-1	8	RASESVDSYgysfMH	BBABBABBLLBBBBB
J	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L2	8	L2-8-4	17	YLASNLES	BEAABBBB
J	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	85.7	L3	9	L3-9-cis7-1	11	QQNNENPLT	BBBABBbBB
J	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	9	GSRTDF	EBEABB
K	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	61.5	H1	13	H1-13-*	-1	KASGCTLTNCFMH	BBBLBBAABLBBB
K	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	80.0	H2	10	H2-10-1	11	YINPYNDMTK	BBBAAALBBB
K	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	100.0	H3	13	H3-13-*	-1	ARGYLLRTGCFDY	BBBBBABBEBBAB
K	heavy	Mus.musculus	Mo_IGHV1-14*01	91.8	Mo_IGHV1-14*01	100.0	H4	8	H4-8-1	10	SDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	93.3	L1	15	L1-15-1	8	RASESVDSYgysfMH	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L2	8	L2-8-4	19	YLASNLES	BEAABBBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	85.7	L3	9	L3-9-cis7-1	10	QQNNENPLT	BBBABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	9	GSRTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022