PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WAS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-11*05	91.8	Hu_IGHV3-11*05	69.2	H1	13	H1-13-3	9	AASGITFSEDYMH	BBBEAAAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-11*05	91.8	Hu_IGHV3-11*05	40.0	H2	10	H2-10-2	8	RISYDSDNTW	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-11*05	91.8	Hu_IGHV3-11*05	100.0	H3	14	H3-14-*	-1	ARAPVWTGYTSLDV	BBBBAAALLABBAB
A	heavy	Homo.sapiens	Hu_IGHV3-11*05	91.8	Hu_IGHV3-11*05	75.0	H4	8	H4-8-1	5	RENAKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*03	85.3	Hu_IGLV6-57*03	69.2	L1	13	L1-13-2	6	TRSSGSIDNEYVR	BBABEBAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*03	85.3	Hu_IGLV6-57*03	87.5	L2	8	L2-8-1	9	YKDNQRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*03	85.3	Hu_IGLV6-57*03	42.9	L3	10	L3-10-1	17	QSSDDNFNWV	BBBBAALBBB
B	lambda	Homo.sapiens	Hu_IGLV6-57*03	85.3	Hu_IGLV6-57*03	100.0	L4	8	L4-8-1	6	idSSSNSA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*05	91.8	Hu_IGHV3-11*05	69.2	H1	13	H1-13-3	9	AASGITFSEDYMH	BBBEAAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*05	91.8	Hu_IGHV3-11*05	40.0	H2	10	H2-10-2	8	RISYDSDNTW	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*05	91.8	Hu_IGHV3-11*05	100.0	H3	14	H3-14-*	-1	ARAPVWTGYTSLDV	BBBBAAALLABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-11*05	91.8	Hu_IGHV3-11*05	75.0	H4	8	H4-8-1	7	RENAKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*03	85.3	Hu_IGLV6-57*03	69.2	L1	13	L1-13-2	9	TRSSGSIDNEYVR	BBABEBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*03	85.3	Hu_IGLV6-57*03	87.5	L2	8	L2-8-1	9	YKDNQRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*03	85.3	Hu_IGLV6-57*03	42.9	L3	10	L3-10-1	18	QSSDDNFNWV	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*03	85.3	Hu_IGLV6-57*03	100.0	L4	8	L4-8-1	5	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022