PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6W5D

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	53.8	H1	13	H1-13-*	-1	KTSGGTYGTYSIN	BBBLELBEBBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-1	11	AIIPIFGKTN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	100.0	H3	14	H3-14-*	-1	ARVEDTALDHYFDY	BBBABAAABABBAB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	87.5	H4	8	H4-8-1	7	ADASTSTA	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	85.7	L1	14	L1-14-2	12	TGTSGDVGtYNYVS	BBBAAAAAABAABB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	75.0	L2	8	L2-8-*	-1	YDVTRRPS	BLAABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	66.7	L3	10	L3-10-*	-1	CSYAGTLTWV	BBBAEBLBBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	53.8	H1	13	H1-13-*	-1	KTSGGTYGTYSIN	BBBLALBEBBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	70.0	H2	10	H2-10-1	10	AIIPIFGKTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	100.0	H3	14	H3-14-*	-1	ARVEDTALDHYFDY	BBBABAAABABBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	94.5	Hu_IGHV1-69*17	87.5	H4	8	H4-8-1	7	ADASTSTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	85.7	L1	14	L1-14-2	12	TGTSGDVGtYNYVS	BBBAAAAAABAABB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	75.0	L2	8	L2-8-*	-1	YDVTRRPS	BLAABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	66.7	L3	10	L3-10-*	-1	CSYAGTLTWV	BBBAEBLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022