PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6W4S

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-8*01	97.3	Mo_IGHV3-8*01	92.3	H1	13	H1-13-1	27	SVTGSSITSDYWN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*01	97.3	Mo_IGHV3-8*01	100.0	H2	9	H2-9-1	24	YISYSGSTY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*01	97.3	Mo_IGHV3-8*01	100.0	H3	12	H3-12-1	23	ARQGLRNWYFDV	BBBBAAALBBAB
H	heavy	Mus.musculus	Mo_IGHV3-8*01	97.3	Mo_IGHV3-8*01	87.5	H4	8	H4-8-1	15	RDTSKNHY	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	86.7	L1	15	L1-15-*	-1	RASKSVSasaySYMH	BBABBABBBLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L2	8	L2-8-1	23	YLASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	85.7	L3	9	L3-9-cis7-1	13	QHNRELPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-12*01	97.1	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022