PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VX4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-20*02	95.9	Mo_IGHV1-20*02	84.6	H1	13	H1-13-1	16	KASGYSFIDYFMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-20*02	95.9	Mo_IGHV1-20*02	80.0	H2	10	H2-10-1	10	RIDPYSGDTF	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-20*02	95.9	Mo_IGHV1-20*02	100.0	H3	12	H3-12-*	-1	AREVLNYYAMDY	BBBABBLBBBAB
H	heavy	Mus.musculus	Mo_IGHV1-20*02	95.9	Mo_IGHV1-20*02	87.5	H4	8	H4-8-*	-1	VDKSSTTA	BBABLLBB
K	kappa	Mus.musculus	Mo_IGKV13-85*01	89.9	Mo_IGKV13-85*01	90.9	L1	11	L1-11-*	-1	KASDHIDNWLA	BBABBABLBBB
K	kappa	Mus.musculus	Mo_IGKV13-85*01	89.9	Mo_IGKV13-85*01	87.5	L2	8	L2-8-4	17	SGATSLKT	BEAABBBB
K	kappa	Mus.musculus	Mo_IGKV13-85*01	89.9	Mo_IGKV13-85*01	85.7	L3	9	L3-9-2	12	QQYWRTPYT	BBAABABBB
K	kappa	Mus.musculus	Mo_IGKV13-85*01	89.9	Mo_IGKV13-85*01	83.3	L4	6	L4-6-1	11	GSGKDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022