PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VTU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	CDRLenMismatch	-1.0	H1	14	H1-14-2	10	AVSGVSINDgYDWT	BBBLBBAABBBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	CDRLenMismatch	-1.0	H2	10	H2-10-1	13	YVFGRSGNFN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	100.0	H3	16	H3-16-*	-1	ARGMEGlfAAYNSLDV
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	83.6	Hu_IGHV4-59*11	75.0	H4	8	H4-8-1	13	KDTCKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-18*01	86.8	Hu_IGLV2-18*01	78.6	L1	14	L1-14-2	8	TGTSSDIGQyNSVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-18*01	86.8	Hu_IGLV2-18*01	62.5	L2	8	L2-8-1	10	YGVTSRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-18*01	86.8	Hu_IGLV2-18*01	11.1	L3	10	L3-10-*	-1	SSHADENMAL	BBBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-18*01	86.8	Hu_IGLV2-18*01	66.7	L4	6	L4-6-2	9	KYGDTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022