PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VRH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV1-26*01	98.6	Mo_IGHV1-26*01	100.0	H1	13	H1-13-1	21	KASGYTFTDYYMN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-26*01	98.6	Mo_IGHV1-26*01	90.0	H2	10	H2-10-1	16	NINPNNGGTS	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-26*01	98.6	Mo_IGHV1-26*01	50.0	H3	12	H3-12-*	-1	TRSPVRPYYFDY	BBBBBLALBBAB
B	heavy	Mus.musculus	Mo_IGHV1-26*01	98.6	Mo_IGHV1-26*01	87.5	H4	8	H4-8-1	17	VDKSSTTA	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	100.0	L1	11	L1-11-*	-1	KASQDVSTAVA	BBABBBAABBB
C	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	100.0	L2	8	L2-8-1	15	YSASYRYT	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	85.7	L3	9	L3-9-cis7-1	14	QQHYSIPRT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022