PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VPX

#CDRs = 8; #Clusters = 15.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	14	SASGFDFDNAWMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	12	RITGpgEGWSVD	BBBBAAALLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyppgEEYFQD
H	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	50.0	H4	8	H4-8-1	10	RLNSINFL	BBAAALBB
K	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	14	SASGFDFDNAWMT	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	12	RITGpgEGWSVD	BBBBAAALLBBB
K	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyppgEEYFQD
K	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	50.0	H4	8	H4-8-1	10	RLNSINFL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	8	RGDSLRSHYAS	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	15	YGKNNRPS	BEAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	11	ASGNRA	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	69.2	H1	13	H1-13-1	14	SASGFDFDNAWMT	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	33.3	H2	12	H2-12-1	12	RITGpgEGWSVD	BBBBAAALLBBB
M	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	0.0	H3	22	H3-22-*	-1	ARTGKYYDfwsgyppgEEYFQD
M	heavy	Homo.sapiens	Hu_IGHV3-15*07	80.8	Hu_IGHV3-15*07	50.0	H4	8	H4-8-1	10	RLNSINFL	BBAAALBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	8	RGDSLRSHYAS	BBAAAAABBBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	15	YGKNNRPS	BEAABBBB
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
N	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	11	ASGNRA	BBEABB
O	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	81.8	L1	11	L1-11-4	8	RGDSLRSHYAS	BBAAAAABBBB
O	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	100.0	L2	8	L2-8-4	15	YGKNNRPS	BEAABBBB
O	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	55.6	L3	12	L3-12-*	-1	SSRDKSGSRlSV
O	lambda	Homo.sapiens	Hu_IGLV3-19*01	77.3	Hu_IGLV3-19*01	66.7	L4	6	L4-6-2	11	ASGNRA	BBEABB
P	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	46.2	H1	13	H1-13-*	-1	VVSDFPFSKYPMY	BBAABBAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	30.0	H2	10	H2-10-2	14	AISGDAWHVV	BBBAALABBB
P	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	100.0	H3	28	H3-28-*	-1	ARmfqesgpprldrwsGRNYYYYSGMDV
P	heavy	Homo.sapiens	Hu_IGHV3-30*10	83.3	Hu_IGHV3-30*10	87.5	H4	8	H4-8-1	17	RDNVKNTL	BBAAALBB
Q	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.2	Hu_IGKV2D-29*02	68.8	L1	16	L1-16-*	-1	KSSESLrqsngKTSLY	BBABBBBBAALBBBBB
Q	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.2	Hu_IGKV2D-29*02	87.5	L2	8	L2-8-*	-1	FEVSNRFS	ABAABBBB
Q	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.2	Hu_IGKV2D-29*02	57.1	L3	9	L3-9-cis7-1	19	MQSKDFPLT	BBAABBbBB
Q	kappa	Homo.sapiens	Hu_IGKV2D-29*02	91.2	Hu_IGKV2D-29*02	100.0	L4	6	L4-6-3	21	GSGTDF	EBAABB

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