PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VOS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	84.9	CDRLenMismatch	-1.0	H1	14	H1-14-2	10	AVSGGSISgGYGWT	BBBLBBAABBBBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	84.9	Ma_IGHV4-2*01	50.0	H2	10	H2-10-1	12	NIYGHSGSTN	BBBAAALBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	84.9	Ma_IGHV4-2*01	100.0	H3	10	H3-10-2	15	ARWSTADFDY	BBBBEABBAB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	84.9	Ma_IGHV4-2*01	100.0	H4	8	H4-8-1	12	TDTSKNQF	BBAAALBB
L	kappa	Macaca.mulatta	Ma_IGKV1S14*01	94.2	Ma_IGKV1S14*01	72.7	L1	11	L1-11-1	8	RASQDITNDLA	BBABBAEABBB
L	kappa	Macaca.mulatta	Ma_IGKV1S14*01	94.2	Ma_IGKV1S14*01	100.0	L2	8	L2-8-1	7	YYASNLES	BLLABBBB
L	kappa	Macaca.mulatta	Ma_IGKV1S14*01	94.2	Ma_IGKV1S14*01	85.7	L3	9	L3-9-*	-1	QQHNNYPLT	BBAABBLBB
L	kappa	Macaca.mulatta	Ma_IGKV1S14*01	94.2	Ma_IGKV1S14*01	83.3	L4	6	L4-6-1	8	GAGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022