PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VJN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*05	93.1	Hu_IGHV4-59*05	69.2	H1	13	H1-13-*	-1	AVSGGSSSDYWWS	BBBLBBABEEBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*05	93.1	Hu_IGHV4-59*05	55.6	H2	9	H2-9-1	10	RIDSIGNTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*05	93.1	Hu_IGHV4-59*05	100.0	H3	13	H3-13-*	-1	ARPYCAIGRCYES	BBBBBBBLBBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*05	93.1	Hu_IGHV4-59*05	100.0	H4	8	H4-8-1	10	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*03	89.7	Hu_IGLV6-57*03	76.9	L1	13	L1-13-2	7	TRTSGSIDSEYVQ	BBABEBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*03	89.7	Hu_IGLV6-57*03	87.5	L2	8	L2-8-*	-1	YRDNQRPS	BLEABBBA
L	lambda	Homo.sapiens	Hu_IGLV6-57*03	89.7	Hu_IGLV6-57*03	57.1	L3	10	L3-10-1	17	QSSDDSYNWV	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*03	89.7	Hu_IGLV6-57*03	100.0	L4	8	L4-8-1	5	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022