PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VGR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	93.2	Mo_IGHV1-62-1*01	69.2	H1	13	H1-13-1	16	KASGGTFSSYWIE	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	93.2	Mo_IGHV1-62-1*01	80.0	H2	10	H2-10-1	15	EILPGSGNTY	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	93.2	Hu_IGHV1-69*15	100.0	H3	16	H3-16-*	-1	ARRAAAyySNPEWFAY
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	93.2	Hu_IGHV1-69*15	100.0	H4	8	H4-8-1	8	ADESTSTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Mo_IGKV4-74*01	83.3	L1	12	L1-12-1	13	TASSSVNSfYLH	BBABBBBAAABB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Mo_IGKV4-74*01	100.0	L2	8	L2-8-1	13	YSTSNLAS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	57.1	L3	9	L3-9-cis7-1	8	HQYHRSPYT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	93.2	Mo_IGHV1-62-1*01	69.2	H1	13	H1-13-1	14	KASGGTFSSYWIE	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	93.2	Mo_IGHV1-62-1*01	80.0	H2	10	H2-10-1	17	EILPGSGNTY	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	93.2	Hu_IGHV1-69*15	100.0	H3	16	H3-16-*	-1	ARRAAAyySNPEWFAY
H	heavy	Homo.sapiens	Hu_IGHV1-69*15	93.2	Hu_IGHV1-69*15	100.0	H4	8	H4-8-1	8	ADESTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Mo_IGKV4-74*01	83.3	L1	12	L1-12-1	9	TASSSVNSfYLH	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Mo_IGKV4-74*01	100.0	L2	8	L2-8-1	10	YSTSNLAS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	57.1	L3	9	L3-9-cis7-1	10	HQYHRSPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022