PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6VC9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-4*07	94.5	Hu_IGHV4-4*07	61.5	H1	13	H1-13-*	-1	TVSGGSIRNNYYN	BBAABBBBBBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-4*07	94.5	Hu_IGHV4-4*07	77.8	H2	9	H2-9-1	13	RIYISGTTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-4*07	94.5	Hu_IGHV4-4*07	100.0	H3	13	H3-13-*	-1	AREHYVSGTSLDN	BBBBAAALBEBAB
H	heavy	Homo.sapiens	Hu_IGHV4-4*07	94.5	Hu_IGHV4-4*07	87.5	H4	8	H4-8-1	25	IDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	92.8	Hu_IGKV3-OR2-268*01	66.7	L1	12	L1-12-1	8	RASQSVNtNYFS	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	92.8	Hu_IGKV3-OR2-268*01	87.5	L2	8	L2-8-4	15	YGTSTRAT	BEAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	92.8	Hu_IGKV3-OR2-268*01	100.0	L3	9	L3-9-cis7-1	9	QQDYNLPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-OR2-268*01	92.8	Hu_IGKV3-OR2-268*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022