PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6V8Z

#CDRs = 8; #Clusters = 15.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Ra_IGHV1-38*01	69.2	H1	13	H1-13-1	15	RASGYNFRDYSIH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Ra_IGHV1-38*01	30.0	H2	10	H2-10-3	19	WIKPLWGAVS	BBBBLALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Hu_IGHV1-18*03	50.0	H3	16	H3-16-*	-1	VRRGSCDYCGDFpwQY
C	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Hu_IGHV1-18*03	0.0	H4	15	H4-15-*	-1	RQLSQDpddpdwgVA
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	53.8	H1	13	H1-13-*	-1	SVSGDSMNNYYWT	BBBLLAAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	25	YISDRESAT	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYSMDV
D	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	21	RDTSKNQL	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	LBBBBEBBBBB
E	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	62.5	L2	8	L2-8-1	16	YNNQDRPS	BLLABBBB
E	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
E	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfGTRA
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Ra_IGKV4S10*01	40.0	L1	10	L1-10-*	-1	KASQGGNAMT	BBABBBABBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Ra_IGKV4S10*01	75.0	L2	8	L2-8-1	17	YDTSRRAS	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	0.0	L3	5	L3-5-1	35	QQFEF	BBAAB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Ra_IGHV1-38*01	69.2	H1	13	H1-13-1	15	RASGYNFRDYSIH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Ra_IGHV1-38*01	30.0	H2	10	H2-10-3	19	WIKPLWGAVS	BBBBLALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Hu_IGHV1-18*03	50.0	H3	16	H3-16-*	-1	VRRGSCDYCGDFpwQY
I	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Hu_IGHV1-18*03	0.0	H4	15	H4-15-*	-1	RQLSQDpddpdwgVA
J	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	53.8	H1	13	H1-13-*	-1	SVSGDSMNNYYWT	BBBLLAAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	25	YISDRESAT	BBBAALBBB
J	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYSMDV
J	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	20	RDTSKNQL	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	LBBBBEBBBBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	62.5	L2	8	L2-8-1	16	YNNQDRPS	BLLABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
K	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfGTRA
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Ra_IGKV4S10*01	40.0	L1	10	L1-10-*	-1	KASQGGNAMT	BBABBBABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Ra_IGKV4S10*01	75.0	L2	8	L2-8-1	17	YDTSRRAS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	0.0	L3	5	L3-5-1	35	QQFEF	BBAAB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
O	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Ra_IGHV1-38*01	69.2	H1	13	H1-13-1	15	RASGYNFRDYSIH	BBBLBBAAABBBB
O	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Ra_IGHV1-38*01	30.0	H2	10	H2-10-3	19	WIKPLWGAVS	BBBBLALBBB
O	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Hu_IGHV1-18*03	50.0	H3	16	H3-16-*	-1	VRRGSCDYCGDFpwQY
O	heavy	Homo.sapiens	Hu_IGHV1-18*03	71.1	Hu_IGHV1-18*03	0.0	H4	15	H4-15-*	-1	RQLSQDpddpdwgVA
P	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	53.8	H1	13	H1-13-*	-1	SVSGDSMNNYYWT	BBBLLAAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	25	YISDRESAT	BBBAALBBB
P	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYSMDV
P	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	21	RDTSKNQL	BBAAALBB
Q	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	LBBBBEBBBBB
Q	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	62.5	L2	8	L2-8-1	16	YNNQDRPS	BLLABBBB
Q	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
Q	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfGTRA
R	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Ra_IGKV4S10*01	40.0	L1	10	L1-10-*	-1	KASQGGNAMT	BBABBBABBB
R	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Ra_IGKV4S10*01	75.0	L2	8	L2-8-1	17	YDTSRRAS	BLLABBBB
R	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	0.0	L3	5	L3-5-1	35	QQFEF	BBAAB
R	kappa	Homo.sapiens	Hu_IGKV3-20*01	79.7	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

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