PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6V4P

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Synthetic.construct	Mo_IGHV1-5*01	93.2	Mo_IGHV1-5*01	76.9	H1	13	H1-13-1	15	EASGYTFTNYWMH	BBBLBBAAABBBB
C	heavy	Synthetic.construct	Mo_IGHV1-5*01	93.2	Mo_IGHV1-5*01	100.0	H2	10	H2-10-1	11	AIYPGNSDTS	BBBAAALBBB
C	heavy	Synthetic.construct	Mo_IGHV1-5*01	93.2	Mo_IGHV1-5*01	50.0	H3	11	H3-11-1	14	TLYDGYYVFAY	BBBBAALBBAB
C	heavy	Synthetic.construct	Mo_IGHV1-5*01	93.2	Mo_IGHV1-5*01	50.0	H4	8	H4-8-1	7	AVTSTTSV	BBAAALBB
D	kappa	Synthetic.construct	Mo_IGKV5-43*01	94.2	Mo_IGKV5-43*01	81.8	L1	11	L1-11-1	16	RASRDISNNLH	BBABBAEABBB
D	kappa	Synthetic.construct	Mo_IGKV5-43*01	94.2	Mo_IGKV5-43*01	87.5	L2	8	L2-8-1	12	KYASQSMS	BLLABBBB
D	kappa	Synthetic.construct	Mo_IGKV5-43*01	94.2	Mo_IGKV5-43*01	85.7	L3	9	L3-9-cis7-1	8	QQTNSWPYT	BBAABBbBB
D	kappa	Synthetic.construct	Mo_IGKV5-43*01	94.2	Mo_IGKV5-43*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022