PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6V4N

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	61.5	H1	13	H1-13-*	-1	TVSGDSIGGSYWN	BBBLBBBELBBBB
A	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	77.8	H2	9	H2-9-*	-1	YIYYTGITN	BBBAALALB
A	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	100.0	H3	19	H3-19-*	-1	ARGDYSGYDrdvqvELMDV
A	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	75.0	H4	8	H4-8-1	9	LDTSKNQI	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	72.7	L1	11	L1-11-*	-1	RASQTISIFLN	BBABBBAABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	15	YAASRLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	7	QQSYSAPWT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	61.5	H1	13	H1-13-*	-1	TVSGDSIGGSYWN	BBBLBBBELBBBB
C	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	77.8	H2	9	H2-9-*	-1	YIYYTGITN	BBBAALALB
C	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	100.0	H3	19	H3-19-*	-1	ARGDYSGYDrdvqvELMDV
C	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	75.0	H4	8	H4-8-1	9	LDTSKNQI	BBAAALBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	61.5	H1	13	H1-13-*	-1	TVSGDSIGGSYWN	BBBLBBBELBBBB
D	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	77.8	H2	9	H2-9-*	-1	YIYYTGITN	BBBAALALB
D	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	100.0	H3	19	H3-19-*	-1	ARGDYSGYDrdvqvELMDV
D	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	75.0	H4	8	H4-8-1	9	LDTSKNQI	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	72.7	L1	11	L1-11-*	-1	RASQTISIFLN	BBABBBAABBB
E	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	15	YAASRLQS	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	7	QQSYSAPWT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
G	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	72.7	L1	11	L1-11-*	-1	RASQTISIFLN	BBABBBAABBB
G	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	15	YAASRLQS	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	7	QQSYSAPWT	BBAABBbBB
G	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	61.5	H1	13	H1-13-*	-1	TVSGDSIGGSYWN	BBBLBBBELBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	77.8	H2	9	H2-9-*	-1	YIYYTGITN	BBBAALALB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	100.0	H3	19	H3-19-*	-1	ARGDYSGYDrdvqvELMDV
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	87.7	Hu_IGHV4-59*11	75.0	H4	8	H4-8-1	9	LDTSKNQI	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	72.7	L1	11	L1-11-*	-1	RASQTISIFLN	BBABBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	15	YAASRLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	7	QQSYSAPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

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