PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UYD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.1	Ra_IGHV1-49*01	53.8	H1	13	H1-13-*	-1	ETSGGTFDNYALN	BBABBBBBBABBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.1	Ra_IGHV1-49*01	40.0	H2	10	H2-10-1	12	GVVPLFGTTR	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.1	Hu_IGHV1-69*17	50.0	H3	20	H3-20-*	-1	VRSVTPRYcgggfcYGEFDY
A	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.1	Hu_IGHV1-69*17	62.5	H4	8	H4-8-1	15	DDKSTGTG	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Ra_IGKV18S1*01	72.7	L1	11	L1-11-1	12	RASQSVSSNLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Ra_IGKV18S1*01	62.5	L2	8	L2-8-1	7	YGASTRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Hu_IGKV3-20*02	100.0	L3	9	L3-9-cis7-1	9	QQYYRSPLT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Hu_IGKV3-20*02	83.3	L4	6	L4-6-1	7	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.1	Ra_IGHV1-49*01	53.8	H1	13	H1-13-*	-1	ETSGGTFDNYALN	BBABBBBBBABBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.1	Ra_IGHV1-49*01	40.0	H2	10	H2-10-1	12	GVVPLFGTTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.1	Hu_IGHV1-69*17	50.0	H3	20	H3-20-*	-1	VRSVTPRYcgggfcYGEFDY
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.1	Hu_IGHV1-69*17	62.5	H4	8	H4-8-1	17	DDKSTGTG	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Ra_IGKV18S1*01	72.7	L1	11	L1-11-1	5	RASQSVSSNLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Ra_IGKV18S1*01	62.5	L2	8	L2-8-1	5	YGASTRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Hu_IGKV3-20*02	100.0	L3	9	L3-9-cis7-1	7	QQYYRSPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Hu_IGKV3-20*02	83.3	L4	6	L4-6-1	4	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022