PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UTK

#CDRs = 8; #Clusters = 15.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-18*02	62.2	Hu_IGHV1-18*02	53.8	H1	13	H1-13-1	13	KTSGYRFNFYHIN	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-18*02	62.2	Hu_IGHV1-18*02	60.0	H2	10	H2-10-1	16	WISPYSGDKN	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-18*02	62.2	Hu_IGHV1-18*02	0.0	H3	16	H3-16-*	-1	AKGLLRdgSSTWLPYL
D	heavy	Homo.sapiens	Hu_IGHV1-18*02	62.2	Hu_IGHV1-18*02	0.0	H4	16	H4-16-*	-1	TDTevpvtsftSTGAA
E	lambda	Homo.sapiens	Hu_IGLV2-18*02	69.1	Hu_IGLV2-18*02	35.7	L1	14	L1-14-*	-1	TGPNSVcCSHKSIS	BBBAAABAAABBBB
E	lambda	Homo.sapiens	Hu_IGLV2-18*02	69.1	Hu_IGLV2-18*02	37.5	L2	8	L2-8-*	-1	YEDNERAP	BLBABBBB
E	lambda	Homo.sapiens	Hu_IGLV2-18*02	69.1	Hu_IGLV2-18*02	44.4	L3	10	L3-10-*	-1	CSYTHNSGCV	BBBBAABBBB
E	lambda	Homo.sapiens	Hu_IGLV2-18*02	69.1	Hu_IGLV2-18*02	50.0	L4	6	L4-6-*	-1	KSYWSA	BBAABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	67.1	Hu_IGHV1-69*17	53.8	H1	13	H1-13-*	-1	KPVGGTFTNFAIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	67.1	Hu_IGHV1-69*17	40.0	H2	10	H2-10-1	21	GRVPVVGIYK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	67.1	Hu_IGHV1-69*17	50.0	H3	23	H3-23-*	-1	TRwrgcgmcpyDTSSYYNDASDV
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	67.1	Hu_IGHV1-69*17	25.0	H4	8	H4-8-1	15	EDDPMKTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	82.6	Hu_IGKV3D-20*02	66.7	L1	12	L1-12-*	-1	RASQNISsSWIA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	82.6	Hu_IGKV3D-20*02	50.0	L2	8	L2-8-1	20	SAASARAA	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	82.6	Hu_IGKV3D-20*02	14.3	L3	9	L3-9-2	21	QYYGGSFFT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	82.6	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022